Python Outbreak.info API
  • authenticate_new_user()
  • cases_by_location(location)
  • lineage_mutations(pango_lin, mutation, freq)
  • all_lineage_prevalences(location, startswith)
  • global_prevalence(pango_lin, mutations, cumulative, lineage_crumbs=False)
  • sequence_counts(location, cumulative, sub_admin)
  • mutations_by_lineage(mutation, location, pango_lin)
  • prevalence_by_location(pango_lin, location, mutations=None, datemin=None, datemax=None, cumulative=None, lineage_crumbs=False)
  • lineage_by_sub_admin(pango_lin, mutations, location, ndays=0, detected)
  • collection_date(pango_lin, mutations=None, location=None)
  • submission_date(pango_lin, mutations=None, location)
  • mutation_details(mutations)
  • daily_lag(location=None)
  • wildcard_lineage(name)
  • wildcard_location(name)
  • wildcard_mutations(name)
  • location_details(location)
  • get_outbreak_data()
  • growth_rates(lineage, location)
  • Epidemiological data analyses
  • Lineage Prevalence Analyses
  • Mutation Data Analyses
  • Dealing with Cryptic Variants
Python Outbreak.info API
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