most_recent_cl_data

outbreak_data.most_recent_cl_data(pango_lin, mutations=None, location=None, submission=False, **req_args)

Get most recent date of clinical sequencing data by location.

Parameters

  • pango_lin -- A string or list of pango lineages. If a list, behavior is OR.

  • mutations -- A string or list of mutations. If a list, behavior is OR.

  • location -- A location ID. If not specified, global data are returned.

  • submission -- True -> submission dates; False -> collection dates.

Returns

The most recent date in YYYY-MM-DD.

Parameter example

{ 'pango_lin': 'ba.2.86.1', 'location': 'USA_US-HI' }

Example Usage

View the last date of sample matching for BA.2.86 in New York:

>>> date = outbreak_data.most_recent_cl_data('BA.2.86', location = 'USA_US-NY' )
>>> date

Timestamp('2024-01-16 00:00:00')