mutation_details(mutations)

outbreak_data.mutation_details(mutations, server='api.outbreak.info')

Returns details of a mutation.

Arguments:

mutations:

(Required). Comma separated list of mutations.

return:

A pandas dataframe.

Example usage:

#Get info on mutation 'orf1b:p314l'
df = outbreak_data.mutation_details('orf1b:p314l')
print(df)

Output

             Key        Values
 0       mutation   ORF1b:P314L
 1      alt_codon           CTT
 2  is_synonymous         False
 3      codon_num           314
 4      ref_codon           CCT
 5           gene         ORF1b
 6            pos         14407
 7         alt_aa             L
 8         ref_aa             P
 9           type  substitution