Python Outbreak.info API

authenticate_new_user()
- authenticate_new_user()
all_lineage_prevalences(location, startswith)
global_prevalence(pango_lin, mutations, cumulative)
mutations_by_lineage(mutation, location, pango_lin)
lineage_by_sub_admin(pango_lin, mutations, location, ndays=0, detected)
collection_date(pango_lin, mutations=None, location=None)
submission_date(pango_lin, mutations=None, location)
mutation_details(mutations)
daily_lag(location=None)
wildcard_lineage(name)
wildcard_location(name)
wildcard_mutations(name)
location_details(location)
get_outbreak_data()
growth_rates(lineage, location)

Epidemiological data analyses
Lineage Prevalence Analyses
Mutation Data Analyses
Dealing with Cryptic Variants

Python Outbreak.info API

authenticate_new_user()
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authenticate_new_user()

authenticate_user.authenticate_new_user(): Authenticate a user for genomics API access. Required to complete for first time use.

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